Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIMFVAAEGAPFAKTGGLGDVIGALPKSLSKKGHDVVVVMPYYDMVDQKFGDQIENLMYFYTDVGWRHQYVGVKRLSQDNVTFYFIDNQYYFYRGHVYGDWDDGE-RFAYFQLAALELMEKIN----------FIPDVLHV-HDYHTAMIPFLLKEKYHWIQAYNNIRTVFTIHNIEFQGQFG----PEM-LGDLFGVGAERYEDG--TLRWNNCLNWMKAAILYSDRVTTVSPSYANE-IKTPEFGKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHF-SKSNLEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGFSFNHFSGYW----------LMQTLKLALEVYNDYPEAWKKLQWQAMSKDFSWDTACVAYEQLYQQLQ |
| 3VUF Chain:A ((10-507)) | MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYD----QYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEK-------KDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFD-FIDGYDTPVEGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTG--ITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIE------GKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGT--PAYEEMVRNCMNQDLSWKGPAKNWENVLLGLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280393 for 3974 contacts (-70.6/contact) +
2D Compatibility (PS) -49411 + (NN) -26313 + (LL) 508
1D Compatibility (HY) -34400 + (ID) 8700
Total energy: -398709.0 ( -100.33 by residue)
QMean score : 0.530
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