Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKPIKISKFKKNVSDSHFIHFFTVFSGIFLVMTVIILQVMRYGVYSSVDSSLKYISTHPKNYINMVMSRTAAYLDNSNIASVKLKPGGQTVANTDIILFTSEEEVINYFDAFSNYQFLKPNKKNLGGISELTLTNIFGQDETYHAVTVKVNNPAYPNVTYMTAIVNIDQLVNAKERYEKIIIFVMTTFWIISIGASIYLAKWAQKPIIENYERQKAFVENASHELRTPLAVLQNRLETLFRKPN----ATILENSENIASSLDEVRNMRILTTNLLNLARRDDGIKPELAVIKPTLFDSIFENYDLIAQENGKNFTGHNMIQDSFKT----------DKTLLKQLMTILFDNAIKYTDNDGS---IDFTISETDKYLFLEIADNGPGISEEDKVRIFDRFYRVDKARTRQQGGFGLGLSLAQQIVNSLRGNITVIDNKPRGSIFKIKLPKVKG |
| 4JAU Chain:A ((23-247)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FIANISHELRTPLTVIKGYAEMIYNSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINRE----KVDLCDLVESAVNAI-----KEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDS---------GLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71022 for 1355 contacts (-52.4/contact) +
2D Compatibility (PS) -21585 + (NN) -11277 + (LL) 18092
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -103892.0 ( -76.67 by residue)
QMean score : 0.498
|
|
|