Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------MRESIFEETAKGKVSRHVLLTIL----LALILLFTA----DFLTYIII------ELIISL-----------DFWKLEWDSDIVQLIILLATSISTVMLFMWVKFKEKRPISSLG----LFKEGALT-ELSRGWLVESVLFGACLILTIISGSGVIETVRFTADKLIWFLIFAVGWQVQSASVEILCRGWLLPVSATK--YSKIVSV------SISSIFFGLLHSANNHVSLISIFN----LCLFGL--FLSLYVILKGNIWGACGIHGAWNCVQGSVFGIEVSGEPMLSNSLVHVKTYGADWISGGKFGVEGSMITSIVLIVACYWLYQKSNFPYD |
1SQ9 Chain:A ((3-395)) | KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNSHRLVATDVK-GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHNNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLN-ESLCCVCLDRSIRWFREAG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289512 for 2117 contacts (-136.8/contact) +
2D Compatibility (PS) -30633 + (NN) 5144 + (LL) -40
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -326941.0 ( -154.44 by residue)
QMean score : 0.091
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