Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEWQDLAQLPVSIFKDYVTDAQDAEKPFIWTEVFLREINRSNQEIILHIWPMTKTVILGMLDRELPHLELAKKEIISRGYEPVVRNFGGLAVVADEGILNFSLIIPDVFERKLSISDGYLIMVDFIRSIFSDFYQPIEHFEVETSYCPGKFDLSI----NGKKFAGLAQRRIKNGIAVSIYLSVCGDQKERSRMISDFYKIGLGDTGSPIAYPNVDPEIMANLSDLLDCPMTVEDVIDRMLISLKQ-VGFNDRLLMIRPDLVAEFDRFQAKSMANKGTVSRDE |
3A7R Chain:A ((1-222)) | --------STLRLLISD---SYDPWFNLAVEECIFRQMPA--TQRVLFLWRNADTVVIGRA--QNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPE-Y------DKTISTSIVLNALNALGVSAEA--------SGRNDLVVKTVEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLN----PD-KKKLAAKGITSV-RSRVTNLTELLP-GITHEQVCEAITEAFFAHYGERVEAEIISPNKTPDLPNFAETFARQSSWEWNFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176425 for 1768 contacts (-99.8/contact) +
2D Compatibility (PS) -23550 + (NN) -5326 + (LL) 2524
1D Compatibility (HY) -2800 + (ID) 2050
Total energy: -207627.0 ( -117.44 by residue)
QMean score : 0.338
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