Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MKRSFFQKTFNLNLNLLFFGFIAFLISYGFHVLGNQIK---TSSFLSSQSVFADIQTKLQVVDQYTQSIAYLFIL---------------IAIILTLTELCQRIMKDSIW---------NYFKSVYQTL
2LGE Chain:A ((1-129))
GDDDEPGGKGAMYEVTIEQSGD-----FRSFIKSVVVVANGTQLKDGATGESLASPVILSDEELAVEKVTLSTTGKAIEFAVSGGVVDGEDGVVNEPMQWVVTVYKNGKEIEKKSLVFRDGKEISTDDLNLYYN--
General information:
TITO was launched using:
RESULT:
Template:
2LGE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57031 for 620 contacts (-92.0/contact) +
2D Compatibility (PS) -9971 + (NN) 5499 + (LL) 672
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -65881.0 ( -106.26 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_2LGE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LGE-query.scw
PDB file :
Tito_Scwrl_2LGE.pdb
: