Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNKMKARFLIGLGGFAVISFIIMIGYTIGSQSVTKQTEHQIQSEAKRLAVKEKQKEKENILSDQLVKEFLTQYYTKEKLGENNHRIKPYMTDSAYSEEVAHQEESINQVYKDYLLDYRFEKAETFVNTETNEALAEVSYQVTYVSDASGNQQKSTQTETKTVKLAYSKLSNKLLVNQITIWNGKLESLKENKTGSNSAIPNIQGTTTMETN |
| 2HF4 Chain:A ((186-239)) | ----------------------------------------------------------------------------------------------------------------DYLMKILTERGYSFTTTEEREIVRDIKEKLCYVA-LDFEQEMATAASSSSLEKSYELKDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3241 for 263 contacts (-12.3/contact) +
2D Compatibility (PS) -5392 + (NN) 2127 + (LL) 9256
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -1100.0 ( -4.18 by residue)
QMean score : 0.354
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