Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKTIYDITIVGGGPVGLFAAFYAGLRGVSVKIIESLSELGGQPAILYPEKKIYDIPGYPVITGRELI---DKHIEQLERFKDSIEICLKEEVLSFEKVDDVFTIQTD-KDQHLSRAIVFACGNGAFAPRLLGLENEENYADNNLFY-NVTKLEQFAGKHVVICGGGDSAVDWANELDKIAASVAIVHRRDAFRAHEHSVDILKAS-GVRILTPYVPIGLNGDSQRVSSLVVQKVKGDEVIELPLDNLIVSFGFSTSNKNLRYWNLDYKRSS-INVSSLFETTQEGVYAIGDAANYPGKVELIATGYGEAPVAINQAINYIYPDRDNRVVHSTSLIK |
| 3F8P Chain:A ((16-319)) | -----FDVIIVGLGPAAYGAALYSARYMLKTLVIGETP--GGQ---LTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYE-----VPVLL-DIVEKIEN---EFVVKTKRKGEFKADSVILGIG---VKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243445 for 2588 contacts (-94.1/contact) +
2D Compatibility (PS) -31243 + (NN) -4697 + (LL) 2008
1D Compatibility (HY) -21600 + (ID) 4100
Total energy: -303077.0 ( -117.11 by residue)
QMean score : 0.381
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