Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHPRPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKE-IGIEIANHIVVFG----GKEITVPDKL----TVQQIKVLSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGVIETIVGGVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIR-QSNNLGGFEGGMTNGEPIIVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF |
| 1R53 Chain:A ((8-363)) | FRVTTYGESHCKSVGCIVDGVPPGMSLTEADIQPQLTRRRP------------DRVEIQSGTEFGKTLGTPIAMMIKN-------------------------------------------------------RETIGRVASGAIAEKFLAQNSNVEIVAFVTQIGEIKMNRDSFDPEFQHLLNTITREKV-DSMGPIRCPDASVAGLMVKEIEKYRGNKDSIGGVVTCVVRNLPTGLGEPC-FD-KLEAMLAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPFY--------RTKTNNSGGVQGGISNGENIYFSVPFKSV-----------------------RHDPAVTPRAIPIVEAMTALVLADALLIQKARDFS----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146700 for 2155 contacts (-68.1/contact) +
2D Compatibility (PS) -28517 + (NN) -13242 + (LL) 7356
1D Compatibility (HY) -15200 + (ID) 5100
Total energy: -201403.0 ( -93.46 by residue)
QMean score : 0.501
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