Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSINIAIDGPASSGKSTVAKIIAKNLNYTYLDTGAMYRCATYLALQHGYEAQDVSKILGLLAERPISFGKAEDGSQTVFIGTEEVTLAIRQNDVTNNVSWVSAIPEIREELVNQQRRIAKDGAIIMDGRDIGTVVLPDAELKIFLVASVDERAERRFKENQEKGIESDFETLKSEIAARDYKDSHREVSPLKAAEDAIEFDTTGVSIEGVVTFIQEKAEKIIDMKN
2FEM Chain:A ((8-213))
-----ITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRF-VSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIK-------------LVPAADALVLDSTTLSIEQVIEKALQYARQKLALA-
General information:
TITO was launched using:
RESULT:
Template:
2FEM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89695 for 1489 contacts (-60.2/contact) +
2D Compatibility (PS) -20427 + (NN) -7530 + (LL) 596
1D Compatibility (HY) -17200 + (ID) 4050
Total energy: -138306.0 ( -92.89 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_2FEM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FEM-query.scw
PDB file :
Tito_Scwrl_2FEM.pdb
: