Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVALIPEKCIACGLCQTYSN-IFDYQDDGIVKFSDTDN-LEKEVPN-SDQDTVLAVKSCPTKALTIL
1IQZ Chain:A ((2-68))
KYTIVDKETCIACGACGAAAPDIYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVA
General information:
TITO was launched using:
RESULT:
Template:
1IQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49889 for 465 contacts (-107.3/contact) +
2D Compatibility (PS) -6858 + (NN) -3996 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -65093.0 ( -139.98 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_1IQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IQZ-query.scw
PDB file :
Tito_Scwrl_1IQZ.pdb
: