Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRVIKVKTISETLDYISKHTASVARFGDGEIDIIAGNSIPYQVYDSELAKRLERLLNRQSNEKLVICVSDVFDNLGRYNDFSQQFWRDHLYQYNDLYQKNCQAEWYGSTFISRPYMDLLDKSLSVTYFEQLKALWKNKDILIVEGETSRSGVGNDLFNDANTISRIICPSKDAFSSFYEIKETILEHSRGKLILLMLGPTAKLLAEDLSQLGHQAIDLGHIDSEYEWFKMGAVSKVKLSHKHTAEHNFDEDITLIEDNSYENQIVSKIGTSDRQYALTVTLTDDIWELEHLLQRCPNTNFHIAAPVYCSDRLKQLVGYPNYYLHEAITEEQFEVLLLNSDIYLDINHGE-------EVWNVVDRCITEGKTIYGIRRARKDNQYISFERTM--DDFEYLCDTIKQNR |
2HY7 Chain:A ((235-348)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEFFVVASKAFPQVTFHVIGSGMGR----HPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA-V-VGPYK-SRFGYTPGNADSVIAAITQAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54815 for 721 contacts (-76.0/contact) +
2D Compatibility (PS) -11010 + (NN) -4924 + (LL) 19808
1D Compatibility (HY) 1200 + (ID) 500
Total energy: -50241.0 ( -69.68 by residue)
QMean score : 0.384
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