Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKELGKTLRRLRKGKKVSISSLADEHLSKSQISRFERGESEITCSRLLNILDKLNITIDEFVSIHSKAH-THFFILLNRVRKYCAEKNVTKLVALLEDHNH------K---DYEKIMIKALIFSIDQSIEPNQEELARLTDYLFTVE--QWGYYEIILLGNCSRLIN----YNTLFLLTKEMVNSFAYSEQNKTNKILVTQLAINCLIISIDHSYFEHSHYLIDKVRSLLQDEVNFYEKTVFLYVTGYYHLKLGDT-SSGKEDMRKALQIFKYLGEDSFYNTYNEHYCQKVLGNNKEC |
| 3U3W Chain:A ((3-282)) | -AEKLGSEIKKIRVLRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVD---YEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH---DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKEALVNK------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116549 for 1928 contacts (-60.5/contact) +
2D Compatibility (PS) -27679 + (NN) -13584 + (LL) 1072
1D Compatibility (HY) -12000 + (ID) 1950
Total energy: -170690.0 ( -88.53 by residue)
QMean score : 0.409
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