Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGYYNGLSFHRVIKDFMIQSGDPNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYL-YNIRGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISG-METVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
4R3E Chain:A ((15-169)) | ---------------------------------------------------------------------------GKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIY---------GAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRAD------------------------ELNNKHTIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71458 for 1224 contacts (-58.4/contact) +
2D Compatibility (PS) -16593 + (NN) -9089 + (LL) 6584
1D Compatibility (HY) -13200 + (ID) 3150
Total energy: -106906.0 ( -87.34 by residue)
QMean score : 0.528
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