Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGIIAAMEEELKLLVENLEDKSQETVLSNVYYSGRYGEHELVLVQSGVGKVMSAMSVAILVESFKVDAIINTGSAGAVATGLNVGDVVVADTLVYHDVDLTAFGYDYGQMSMQPLYFHSDKTFVSTFEAVLSKEEMTSKVGLIATGDSFIAGQEKIDVIKGHFPQVLAVEMEGAAIAQAAQATGKPFVVVRAMSDTAAHDANITFDEFIIEAGKRSAQVLMAFLKAL
4F2P Chain:A ((17-245))
MKIGIIGAMEEEVTLLRDKIDNRQTITLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLASTLKVGDIVVSDETRYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAESCIRELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPDAVAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSTLMVETLVQKL
General information:
TITO was launched using:
RESULT:
Template:
4F2P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170777 for 2064 contacts (-82.7/contact) +
2D Compatibility (PS) -24766 + (NN) -8166 + (LL) 0
1D Compatibility (HY) -19600 + (ID) 4850
Total energy: -228159.0 ( -110.54 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_4F2P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F2P-query.scw
PDB file :
Tito_Scwrl_4F2P.pdb
: