Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALELLTPFTKVELEEKKRDTNRKQIGIMGGNFNPVHNAHLVVADQVRQQLCLDQVLLMPEFQPPHIDKKETIDEQHRLKMLELAIEGIDGLSIEPIEIERKGISYTYDTMKLLIEKNPDVDYYFIIGADMVEYLPKWHRIDELVKMVQFVGVQRPKYKAGTSYPVIWVDLPLMDISSSMIRQFIKSNRQPNYLLPKEVLDYIRKEGLYK
2H29 Chain:A ((2-188))
-----------------------KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYE
General information:
TITO was launched using:
RESULT:
Template:
2H29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139709 for 1444 contacts (-96.8/contact) +
2D Compatibility (PS) -20483 + (NN) -14993 + (LL) 2048
1D Compatibility (HY) -16800 + (ID) 3850
Total energy: -193787.0 ( -134.20 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_2H29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H29-query.scw
PDB file :
Tito_Scwrl_2H29.pdb
: