Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKLMDKYGITEDSSIDLIKASIASFWKNVVYMFPITLILFFLMNISNSKYLQEWFYFVSILIVFVVMYYFTNRQYIKSYSTTFKGSKNLRIELVEIIKRLPLSYFSTHDLTDLSQTVMADVSKIEQALSHAICAYYGWIGYFVFLSLSLLIGSLQLGLCIIVPVITALLILYLSKNIQYRINRKYYKKLRENSQAFQDSFEMQQDIKSYNMQHTVRKDVQDKLKDSEKIQIKTELFTTIPSSLLSILPQFSIALVIIFGFQLYLTGQIQLIFYIGYIICATKVASGFTGMLDSLLMIINFQSSFKQVTAIRKTPLQEGVNA---DIQTFNVEFRDVSFAYEKGR-NVVSNLSFNANQGEVTAIVGPSGCGKSTILKLLSRLYDYNAGQILIGGKDISEISTNSLFENISTVFQDVELFDDTIFENIKCGNPKATIEEVLEAAKIANVDEIADKFVDKYDTKIGENGSKLSGGERQRISIARAILKDAPIILLDEISASLDIENEIKIQAGLDKLIKNKTVIIVSHRMKSIENANKIIVIENGKVENFGTHSYLLENSTRYRKLVECSQLASEYEY |
| 2ONJ Chain:A ((324-578)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQNL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ONJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146851 for 2044 contacts (-71.8/contact) +
2D Compatibility (PS) -27601 + (NN) -12661 + (LL) 28884
1D Compatibility (HY) -22400 + (ID) 5550
Total energy: -186179.0 ( -91.09 by residue)
QMean score : 0.524
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