Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGE--READFINCVIWRQQAENLANWAKKGALVGITGRIQTRNYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDDLPF
2VW9 Chain:A ((1-109))
MFNKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQFMDKKS--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VW9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70722 for 765 contacts (-92.4/contact) +
2D Compatibility (PS) -11700 + (NN) -3888 + (LL) -888
1D Compatibility (HY) -6000 + (ID) 2000
Total energy: -95198.0 ( -124.44 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_2VW9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VW9-query.scw
PDB file :
Tito_Scwrl_2VW9.pdb
: