Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METKINNSQKNRYKFVFGDKPLTLTTDKDNLFMEEIERVATEKY-EAIKEKLPNADNETIAILMAINALSVQLSREI---DIEKMEDELNKLRSKTISDIKEKVSED
1TJE Chain:A ((39-140))
---RVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWH
General information:
TITO was launched using:
RESULT:
Template:
1TJE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 21951 for 519 contacts (42.3/contact) +
2D Compatibility (PS) -10354 + (NN) -941 + (LL) 364
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: 2970.0 ( 5.72 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_1TJE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TJE-query.scw
PDB file :
Tito_Scwrl_1TJE.pdb
: