Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIPLFKELKTDQWVKPFFKQYKVSLVIALFLGFMTFFSASALMFNSGYLISKSASLPSNILLVYVPIVLTRAFGIGRPVFRYIERLTSHNWVLRMTSQLRLKLYHSLESNAIFMKRDFRLGDVMGLLAEDINYLQNLYLRTIFPTIIAWLLYSFIIIATGFFSLWFALMMLLYLAIMIFLFPLWSI-----LANGARQTREK-----ELKNHLYTDLTDNVLGISDW-IFSQRGQEYVALHERSESELMAIQKKIRSFNNRRALIVELVFGFLAILVIIWASNQFIGHRGG-EANWIAAFV----LTVFPLSEAFAGLSAAAQETNKYSDSIHRLNELSETYFETTQNQLPNKPYDF-----SVKNLSFQYKPQEKWVLHHLDLDIKEGEKIAILGRSGSGKSTLASLLRGDLKASQGKITLGGADV-SIVGDCISNYIGVIQQAPYLFNTTLLNNIRIGNQDASEEDVWKVLERVGLKEMVTDLSDGLYTMVDEAGLRFSGGERHRIALARILLKDVPIVILDEPTVGLDPITE---QALLRVFMKELEGKTLVWITHHLKGIEHADRILFIENGQLELEGSPQELSQSSQRYRQLKAADDGDL |
| 4A82 Chain:A ((70-572)) | --------------------------------------------------------------------------FVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNI---WLDCITIIIA---LSIMFFLDVKLTLAAL-FIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLH----ERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTR-WNAYSFAAINTVTDIGPIIVI--GVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFA----SMDRVFQLIDEDYDI-KNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKD---RTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQNL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264091 for 3519 contacts (-75.0/contact) +
2D Compatibility (PS) -50837 + (NN) -21517 + (LL) 8480
1D Compatibility (HY) -37200 + (ID) 1600
Total energy: -366765.0 ( -104.22 by residue)
QMean score : 0.079
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