Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRIQKNILREFEMESSEQALAIWSVLSDVYDKSPWSLSQISEDLKKDSTD-----YFFVYNDGEVIGFLAL--QQLVGEVEITNIAVKKNYQGKGYAYQLMSMI-------ADIEVPVFLEVRYSNIVAQKLYERCGFVVLGKRKNYYHDPIEGAIVMRKG
3OWC Chain:A ((46-159))
--------------------------------RHPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDRRNGVVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIER-VELNVYDWNAAARHLYRRAGFREEGLRRSATRVGRERWNVVLMG
General information:
TITO was launched using:
RESULT:
Template:
3OWC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61897 for 535 contacts (-115.7/contact) +
2D Compatibility (PS) -11105 + (NN) -3845 + (LL) 3108
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: -79789.0 ( -149.14 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_3OWC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OWC-query.scw
PDB file :
Tito_Scwrl_3OWC.pdb
: