Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIHDMIKTIEHFAETQADFPVYDILGEVHTYGQLKVDSDSLAAHIDSLGLVEKSPVLVFGGQEYEMLATFVALTKSGHAYIPVDQHSALDRIQAIMTVAQPSLIISIGEFPLEVDN----VPILDVSQVSAIFEEKTPYEVTHSVKGDDNYYIIFTSGTTGLPKGVQISHDNLLSFTNWMISDDEFSVPERPQMLAQPPYSFDLSVMYWAPTLAMGGTLFALPKTVVNDFKKLFATINELPVQVWTSTPSFADMALLSNDF--NSETLPQLTHFYFDGEELT----VKTAQKLRQRFPKARIVNAYGPTEATVALSAVAITD--EMLETCKRLPIGYT-KDDSPTYVIDEEGHKLPNGEQGEIIIAGPAVSKGYLNNPEKTAEAFFQFEGLPA---YHTGDLGSMTDEGLLLYGGRMDFQIKFNGYRIELEDVSQNLNKSQYVKSAVAVPRYNKDHKVQNLLAYIVLKEGVRDDFERDLDLTKAIKEDLKDIMMDYMMPSKFIYREDLPLTPNGKIDIKGLMSEVNK |
| 4D56 Chain:A ((57-516)) | -----------------------------TYEELNTKANQLAHYLRTLGVKSETLVGVCVDRSLEMVIGLLAILKAGGAYVPLDPTYPRERLTYMVQDAQISVLVTQTQWSNLISDYQGQVICLD-SQWAKI-ASYSQENLVNTVNPENLAYVIYTSGSTGKPKGVMIEHQSLVNFTKLAIAQYQITTSDRTLQFVS--ISFDVAAEEIYVTLCSGATLILRTEEMISSIPSFVQKSQDWQITVW-SLPT-AYWHLLVNELVKSKIALPDSLRLVIIGGERVQPELVRMWFKNVGNFPE--LINVYGPTEGTIAVSLCRLSQLTESQRNRTEIPIGKSLGENISVYVLDETLKTVPPETPGEIYIGGTALARGYLNRPELTAQKFIQDPFSPSERLYKTGDLGRYLADGNLEYLGRVDHQVKINGFRVELGEIETVLLQHHQVAQAVVIDR--------RLVAYLV-------PHSTEENLTVTLQQFLKNKLPSYMIPATFVVL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199711 for 3627 contacts (-55.1/contact) +
2D Compatibility (PS) -46393 + (NN) -13893 + (LL) 4732
1D Compatibility (HY) -35200 + (ID) 7100
Total energy: -297565.0 ( -82.04 by residue)
QMean score : 0.410
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