Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKFGFLSVLEEELDKHLQYDFAMDWDKKNHTVEVTFILEAQNSSAIETVDDQGETSSEDIVFEDYVLFYNPVKSRFDAEDYLVTIPYEPKKGLSREFLAYFAE------TLNEVATEGLSD---------LMDFLTDDSIEEFGLSWDTDAFENGRAELKETEFYPYPRY |
| 2NNY Chain:A ((38-92)) | --------------------------------------------------------------------------------------------------VRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSSQSF-ISWTGDGWEFKLSDPDEVARRWGKRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3204 for 158 contacts (-20.3/contact) +
2D Compatibility (PS) -4128 + (NN) -1907 + (LL) 6868
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -5821.0 ( -36.84 by residue)
QMean score : 0.187
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