Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQRFFHFLVWSLTSSATFVFIGILSFFGLNQSIFLSIVYGLASGAAVYIAGIWNARRLFLKKHELTGREYAYIKKNLEEARQKMVRLRKALFQAKSIQMFKQNAEMLRIVRRIYLLTKKEPKRFYQAERFFYQTLDSVVE----LTEKYAFLSSHPKKS-KELSMSLSETRITLTELTKRLEEDLTQAMGDEIDELQFELDAAKHSLKK |
3RKG Chain:A ((160-258)) | --------------------------------------------------------------------------------------------------------EVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLENDDDLANMYLTVKKSPKDNFSDLEM-LIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7932 for 478 contacts (16.6/contact) +
2D Compatibility (PS) -10188 + (NN) -3414 + (LL) 10352
1D Compatibility (HY) -6000 + (ID) 1350
Total energy: -2668.0 ( -5.58 by residue)
QMean score : 0.375
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