Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKINKDIRTFIDNKQIPSVKTSEITASFKTSMENQSSKMKLDQLTRLLSDIEAFGKRLTKSRNFKDLARFKGLVKRFVKEAVDSG-----LSHETSKSFDLYGNSRTLGLVKEIDDKLIQLTEEMMDQE---------KPAIDLLERIGEIKGLLINLYT |
3C3L Chain:A ((427-514)) | -----------------------------------------------------YAYNMTRVGRMQMLGKYNPQSAKLVREAILPTKATLDLSNQNNEDFSAF----QLGLAQALDIKVHTMTREVMSDELTKLLEGNLKPAIDMM--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6117 for 349 contacts (17.5/contact) +
2D Compatibility (PS) -7590 + (NN) 904 + (LL) 5048
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -3021.0 ( -8.66 by residue)
QMean score : 0.177
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