Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSLHDDERLDYLLAEDMKIIQSPTVFAFSLDAVLLSKFAYVPIQKGKIVDLCTGNGIVPL-LLSTRSKADILGVEIQERLHDMAVRSVEYNKLDDQIQIIHDDLKNMPEKLGHNRYDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCTLEDVISVSSKLLKQGGKAALVHRPGRLLEIFELMKAYQIEPKRVQFVYPKQGKEANTILVEGIKGGRPDLKILPPLFVYDEQNEYTKEIRTILYGDK |
| 4DCM Chain:A ((223-321)) | ---------------------------------------------EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM-PEALDRCEFMINNALSGVEPFRFNAVLCNPPF-------DNVAWEMFHHAR------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19885 for 671 contacts (-29.6/contact) +
2D Compatibility (PS) -9842 + (NN) -6590 + (LL) 12112
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -29505.0 ( -43.97 by residue)
QMean score : 0.494
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