Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIEVGSKLQGKITGITNFGAFVELP--GGSTGLVHISEVADNYVKDINDHLKVGDQVEVKVINVE-KDGKIGLSIKKAKDRPQARPRNDFRPKESFEQKMNKFLKDSEDRLSSLKRNTESKRGGRGARRG
3AEV Chain:A ((10-84))
---EEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHIDLSLRR-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3AEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40863 for 473 contacts (-86.4/contact) +
2D Compatibility (PS) -7647 + (NN) 542 + (LL) 2312
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: -54806.0 ( -115.87 by residue)
QMean score : 0.706
(partial model without unconserved sides chains):
PDB file :
Tito_3AEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AEV-query.scw
PDB file :
Tito_Scwrl_3AEV.pdb
: