Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYVNGRYMEE----KDAVLSPFDHGFLYGIGVFETFRLYEG----CPFLLDWHIERLERALKDLQIEYTVSKHEILEMLDKLLKLN--DIKDGNARVRLNISAGISDKGFVAQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRRNTPEG-SFRLKSHHYLNNMYAKREIGNDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLDTGILDGVTRRFIIENAKDIGLELKTGRYELEALLTADEAWMTNSVLEIIPFTKIEEVNY-GSQSGEATSALQLLYKKEIKNMIHEKGGRAWRSTQ |
| 4PBC Chain:A ((17-301)) | IVYLSVSAQEELVPLSEARVPVLDRGFIFGDGVYEVVPVYAHDGAHVPFRIEQHLDRLARSLKKIGIDNPHDAAGWRALIERVVAANAEGLGDGNALVYLQVTRGVAKRGHAFPANAVPTVFAMTSPLR---LPSEEE-RAKGVRCVTAEDR-CDIKSISLLGNVLMAQHAAERDAFETIQLRDEN-VTEGSSSNVWIVKNGELFAPPR--------RYALVEQLADECGIRFVAREISEVELRSADEIMLTSATKEILPVTSLDDLPVQGGKPGPVFAALYDAYQR------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146782 for 1825 contacts (-80.4/contact) +
2D Compatibility (PS) -27983 + (NN) -7930 + (LL) 1224
1D Compatibility (HY) -15600 + (ID) 3550
Total energy: -200621.0 ( -109.93 by residue)
QMean score : 0.459
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