Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGKYDSLDKALLHAKEMIDDGAHIIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVPISVDTYKASVADEAVKAGASIINDIWGAKHDPKMASVAAEHNVPIVLMHNRPERNYNDLLPDMLSDLMESVKIAVEAGVDEKNIILDPGIGFAKTYHDNLAVMNKLEIFSGLGYPVLLATSRKRFIGRVLDLPPEERAEGTGATVCLGIQKGCDIVRVHDVKQIARMAKMMDAMLNKGGVHHG
3H2C Chain:A ((34-294))
------------------LNLNEKTLIMGILN---------GSYNEVDAAVRHAKEMRDEGAHIIDIG-ESTR------SVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIGK------
General information:
TITO was launched using:
RESULT:
Template:
3H2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153706 for 2086 contacts (-73.7/contact) +
2D Compatibility (PS) -27136 + (NN) -15371 + (LL) 1152
1D Compatibility (HY) -30400 + (ID) 8150
Total energy: -233611.0 ( -111.99 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_3H2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H2C-query.scw
PDB file :
Tito_Scwrl_3H2C.pdb
: