Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKVYVEGMEFYGYHGVFTEENKLGQRFKVDLTAELDLSKAGQTDDLEQTINYAELYHVCKDIVEGEPVKLVETLAERIAGTVLGKFQPVQQCTVKVIKPDPPIPGHYKSVAIEITRKKS
2DHN Chain:A ((3-120))
-DTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLSEAGRTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVREN-
General information:
TITO was launched using:
RESULT:
Template:
2DHN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61362 for 840 contacts (-73.0/contact) +
2D Compatibility (PS) -12774 + (NN) -7640 + (LL) 180
1D Compatibility (HY) -12800 + (ID) 2800
Total energy: -97196.0 ( -115.71 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_2DHN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DHN-query.scw
PDB file :
Tito_Scwrl_2DHN.pdb
: