Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHNISDIIEQYLKRVLDQNGKEILEIKRSEIADKFQCVPSQINYVINTRFTSERGYIVESKRGGGGYIRIIKIKMNNEVVLINNIISQINTHLSQAASDDIILRLLEDKVISEREAKMMVSVMDRSVLHIDLPERDELRARMMKAMLTSLKLK
3DV8 Chain:A ((146-210))
---SLDKRVASFLLEETSIEGTNELKITHETIANHLGSHREVITRMLRY--FQVEGLVKLS---R-GKITILDS--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DV8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33534 for 403 contacts (-83.2/contact) +
2D Compatibility (PS) -6736 + (NN) -686 + (LL) 8016
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -34590.0 ( -85.83 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_3DV8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DV8-query.scw
PDB file :
Tito_Scwrl_3DV8.pdb
: