Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKRIVQAFFIIFGGVVGIFLIPELFVLLNIQDIPLITNAYTSAAIGAIIFFLISIWGTEYVVNWVKWIEDSLLKAPVPDLLFGSLGLVFGLIIAYLIVNVIPLDNIPYRIFSTIIPVFLAFFLGYLGFQVGFKKKDELISLFSISARMQKKKGTADEEHEVQDKKLKILDTSVIIDGRIADICQTGFL-EGVIVIPQFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKE---LDIEVEIYEG-------DFEDIQEVDSKLVKLAKLTSGVVVTNDFNLNKVCELQKVAVLNINDLANAVKPVVLPGEEMNVQVIKDGKEHNQGVAYLDDGTMIVVEEGRNYIGKHIDVLVTSVLQTAAGRMIFAKPKLLEKAL |
3I8O Chain:A ((3-136)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------AKKVCVDTCVVIDGRITELIERGKLKDATIIIPEAVVSELEYQANMGREI----GYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQYNLAKAQGIEAYFLEAAEEE--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86253 for 926 contacts (-93.1/contact) +
2D Compatibility (PS) -13695 + (NN) -4689 + (LL) 20372
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -93565.0 ( -101.04 by residue)
QMean score : 0.546
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