Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEFDTIKDSKQLNGLALAYIGDAIFEVYVRHHLLKQGFTKPNDLHKKSSRIVSAKSQAEILFFLQNQSFFTEEEEAVLKRGRNAKSGTTPKNTDVQTYRYSTAFEALLGYLFLEKKEERLSQLVAEAIQFGTSGRKTNESAT
3RIA Chain:A ((273-336))
------IKAIDVWIGACMTFIFCALLEFALVNHIANAGTTEWNDISKRVDLI--SRALFPVLFFVFNILYWS-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7228 for 323 contacts (22.4/contact) +
2D Compatibility (PS) -6781 + (NN) -3246 + (LL) 5696
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -3953.0 ( -12.24 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_3RIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RIA-query.scw
PDB file :
Tito_Scwrl_3RIA.pdb
: