Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIKNGKKKVVKKKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLLPGEAETILKRMGMDERKTDIDFELKETVKVIDGPFANFTGSIEEIDYDKSKVKVFVNMFGRETPVELEFTQIDKL
2OUG Chain:A ((2-156))
--QSWYLLYCKRGQLQRAQEHLERQA---------VNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPA----IVPS---AVIHQLSVYK-----------KVIITEGAFEGFQAIFTEPD-GEARSMLLLNLINKEIKHSVKN------
General information:
TITO was launched using:
RESULT:
Template:
2OUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38659 for 1000 contacts (-38.7/contact) +
2D Compatibility (PS) -15082 + (NN) -4827 + (LL) 2612
1D Compatibility (HY) -8800 + (ID) 1500
Total energy: -66256.0 ( -66.26 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_2OUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OUG-query.scw
PDB file :
Tito_Scwrl_2OUG.pdb
: