Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVKKEKGRKRFRKRKTFGNQILPLELLIEKNKREIINSAELMEEIYMKIDEKHTQCVTK-------
2W0C Chain:P ((1-65))
MNTSVPTSVPT--NQSVWGNVSTGLDALISGWARVEQIKAAKASTGQGRVEQAMTPELDNGAAVVVE
General information:
TITO was launched using:
RESULT:
Template:
2W0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7530 for 190 contacts (39.6/contact) +
2D Compatibility (PS) -6301 + (NN) -1591 + (LL) 232
1D Compatibility (HY) 2000 + (ID) 450
Total energy: 1420.0 ( 7.47 by residue)
QMean score : 0.604
(partial model without unconserved sides chains):
PDB file :
Tito_2W0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W0C-query.scw
PDB file :
Tito_Scwrl_2W0C.pdb
: