Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
4QBI Chain:A ((1-217))
MNLVLMGLPGAGKGTQAEKIVEAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDEVTIGIVRERLGKDDCERGFLLDGFPRTVAQAEALEEILEDIGRKIDYVIHIDVRQDVLMERLTGRRICRNCGATYHLIFHPPAKPGVCDKCGGELYQRADDNEETVAKRLEVNMKQMKPLLDFYEQKGYLRNVNGEQDIEKVFADVRELLGGLKR
General information:
TITO was launched using:
RESULT:
Template:
4QBI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76127 for 1614 contacts (-47.2/contact) +
2D Compatibility (PS) -24160 + (NN) -18125 + (LL) 0
1D Compatibility (HY) -29200 + (ID) 8850
Total energy: -156462.0 ( -96.94 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_4QBI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBI-query.scw
PDB file :
Tito_Scwrl_4QBI.pdb
: