Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILKTDDGKKAIKELLNDDAMNEALVIDQDAIKG---TIEKTLTSKKGEEFWKNIFEDTDFAEGFAKTLQTEHEKVIKKLMKDPDYQKMLMSVMQDPGMDKKY-------SQLAKSQEFRSYLEEVINETLSSPLYKKQFEDELKKAAKDTAKESE |
1P32 Chain:A ((165-275)) | ---------------------------------TPNFVVEVIKNDDGKKA---LVLDCHYPED------EAESDIFSIREVSFQSTGESEWK----DTNY------TLNTDS--------LDWALYDHLMDFLADRGVDNTFADELVELSTALEHQEYITFLEDL------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16156 for 486 contacts (33.2/contact) +
2D Compatibility (PS) -10009 + (NN) -1118 + (LL) 7584
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: 3713.0 ( 7.64 by residue)
QMean score : 0.227
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