Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTYEVTVPTDKIAITGSVESMEDA-KLLDVHPQGAISFSGKFPDMFKDITDKA---EPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENM---MLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAP--NEVKAAKAQELSS------LEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPLAQGGTAWSKVRFLKAAAEKLTQN |
| 3LI2 Chain:A ((12-282)) | --------------------------------------------DENGTVKVPKDAKRIVVLEYSFADALAALDVKPVG-IADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKDEIKFD-RNQKVLPAVVAKAGLLAHPNYSYVGQFL-NELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMII-MTDHAKKDSAE-FKKLQEDATWKKLNAVKNNRVDIVDRD-------VWARSRGLISSEE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19806 for 2020 contacts (-9.8/contact) +
2D Compatibility (PS) -27933 + (NN) -17891 + (LL) 4744
1D Compatibility (HY) -10800 + (ID) 3500
Total energy: -75186.0 ( -37.22 by residue)
QMean score : 0.472
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