Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYENPDIKLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSLYGKTKKP-TPEM--LKNVDILMFDIQDVGTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFNKEFSIDADLTVVKMKHWKRKMDFDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEETLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTDRDKFEAVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKTLQQFSKTRKKYLIY |
4TV5 Chain:A ((14-118)) | -----------------------------------------------------------------------------------------------------------------GDSVYGIFNSIPDPLMIEVIAASGYDFVVIDTEH-VAI--ND-ETLAHLIRAAEAAHIIPIV--RVTAVIDRDI-IKVLDM------GARGIIVPHVKDRETVEHIVK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31055 for 601 contacts (-51.7/contact) +
2D Compatibility (PS) -10327 + (NN) -5137 + (LL) 18952
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -33317.0 ( -55.44 by residue)
QMean score : 0.520
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