Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQDISLSFYKPEHLPELQSFTLTNDDKRFTSL---PKEVLSQALGIQDRYPVVILKDDLPVGFFILHASKETLASYSNNPFALLLSSLSLTAVHHGKGYAKKAMLLLPAFVSGYFPWCDEIILAVNHLNIRAKHLYMKSGFLDKGRRRIGPLGEQLILHHFL
2DXQ Chain:A ((4-144))
--DAISLRAAGPGDLPGLLELYQVLNPSDPELTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATLLIV-PNLTR--AARPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGA--NCYKVMLLTGRHDPAVHAFYESCGFVQNKTG---------------
General information:
TITO was launched using:
RESULT:
Template:
2DXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101492 for 926 contacts (-109.6/contact) +
2D Compatibility (PS) -15434 + (NN) -7630 + (LL) 1552
1D Compatibility (HY) 800 + (ID) 1150
Total energy: -123354.0 ( -133.21 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2DXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXQ-query.scw
PDB file :
Tito_Scwrl_2DXQ.pdb
: