Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKQYRVLLYYKYVPIEDPEAFREQHLAFCKELGLLGRILVSSEGINGTVSGTVEQTEKYMETMKADPRFADMVFKIDEAEGHAFKKIFVRHKKELVTLRLEDDVDPNETTGQHLKPAEFYEKMQDPNTIVIDARNDYEYDLGHFRGAVRPDIEAFR----ELPEWIEEHKDMLEGKKILTYCTGGVRCEKFSGWLVKQGFEDVAQLDGGIVTYGKDPEVQGKLWDGQCYVFDERISVPVNRVEHVIVGKDYFTGEPCERYVNCANPSCNKKMICTPENEYKYMRSCSHECRTNPRNLYVKEHNMTEEEVNARLAAIETEDHAAAE
4OCG Chain:A ((486-561))-------------------------------------------------------------------------------------------------------------------------------DQLLLDVRNPGELQNGGLEGAVNIPVDELRDRMHELP------KD----KEIIIFCQVGLRGNVAYRQLVNNGYR-ARNLIGGYRTY----------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 312 -47644 -152.71 -661.72
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -152.71
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_4OCG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OCG-query.scw
PDB file : Tito_Scwrl_4OCG.pdb: