Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKKIIGIGVSAMLALSLAACGSENDENASAAEQVNKTIIGIDPGSGIMSLTDKAMKDYDL-NDWTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMFSRYK----LKYLDDP----------------KQSYG-SAEEIHTITRKGFSKEQPNAAKLLSQFKWTQDEMGEIMIKVEEGEKPAKVAAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPNTHKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLKK
1R9L Chain:A ((133-256))--------------------------------------LTGCNPGWGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFA---------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1R9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 270 -38272 -141.75 -375.22
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -141.75
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.339

(partial model without unconserved sides chains):
PDB file : Tito_1R9L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R9L-query.scw
PDB file : Tito_Scwrl_1R9L.pdb: