Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEQKDMYVLGIETSCDETAAAIV-KNGKEIISNVVASQIESHKRFGGVVPEIASRHHVEQITLVIEEAFRKAGMTYSDIDAIAVTEGPGLVGALLIGVNAAKALSFAYNIPLVGVHHIAGHIYANRLVED---IVFPALALVVSGGHTELVYMKEHGSFEVIGETLDDAAGEAYDKVARTMGLPYPGGPQIDKLAEKG-NDNI------------PLPRAWLEEGSYNFSFSGLKSAVINTLHNASQKGQEIAPE----DLSASFQNSVIDVLVTK-----TARAAKEYDVKQVLLAGGVAANRGLRAALEKEFAQHEGITLV---IPPLALCTDNAAMIAAAGTIAFEKGIRGAYDMNGQPGLELTSYQSLTR
3WUH Chain:A ((7-363))----KGYKVLAIETSCDDTCVSVLDRFSKSAAPNVLANLKDTLD--------KAHIHHQARIGPLTERALIESN-AREGIDLICVTRGPGMPGSLSGGLDFAKGLAVAWNKPLIGVHHMLGHLLIPRMGTNGKVPQFPFVSLLVSGGHTTFVLSRAIDDHEILCDTIDIAVGDSLDKCGRELGF---KGTMIAREMEKFINQDINDQDFALKLEMP--------RNMLSFSFSAFITALRTNLTKLGKT-----PEREIRSIAYQVQESVFDHIINKLKHVLKSQPEKFKNVREFVCSGGVSSNQRLRTKLETEL--------FNFYYPPMDLCSDNSIMIGWAG-IEIWESLRLVSDLDICP------------


General information:
TITO was launched using:
RESULT:

Template: 3WUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1595 -177779 -111.46 -600.60
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -111.46
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_3WUH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WUH-query.scw
PDB file : Tito_Scwrl_3WUH.pdb: