Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPQTEQIHQHSVLRDIIRSRRSIRKFKQEPVPSAVILDMLETAKYAPNHRVTEPWRFIYVSSETGKANL---------INTFAAFSKKSKPDMTEEKLQNFKNTLGRVPGFLLVVFQE----DENERARDDDFAATSSLIQNLQLLAWEKGIGMVWKSGKIL-YDKEVHQAFGLQDNERFAAIIQTGYPDEAPEVK--KRTPIRDRFTEM
4TTC Chain:A ((52-252))-PEKEMVKRSQEFYELLNKRRSVRFISNEQVPMEVIDNVIRTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEEEEEINYMKRMGHRWVTDLKKLRTNWIKEYLDTAP-ILILIFKQVHGFAANGKKKVHYYNEISVSIACGILLAALQNAGLVTVTTTPLNCGPRLRVLLGRPAHEKLLMLLPVGYPSKEATVPDLKRKPL-------


General information:
TITO was launched using:
RESULT:

Template: 4TTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 699 -91416 -130.78 -494.14
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -130.78
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.341

(partial model without unconserved sides chains):
PDB file : Tito_4TTC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TTC-query.scw
PDB file : Tito_Scwrl_4TTC.pdb: