Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDMLYWLLIAAVFIIAFIGLVYPVI-------------PSVVFIVAGFVLYGFLFSFSPYSYMFWLVEAVFAAVLFAADYVSNLLGVKRFGGSKAAIWGSTIGLLIGPFVIPVAGIILGPFIGAVCAELIVHQKDLKSAFKIGLGSLIGFLTGVIAKGIIQLLMIGYFLWTVL
2PRC Chain:M ((146-231))-----WNFAAAIFFVLCIGCIHPTLVGSWSEGVPFGIWPHIDWLTAFSIRYG-NFYYCPW-HGFSIGFAYGCGLLFAA-HGATILAVARFGGDR-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 96 -26170 -272.60 -358.49
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain M : 0.50

3D Compatibility (PKB) : -272.60
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.091

(partial model without unconserved sides chains):
PDB file : Tito_2PRC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PRC-query.scw
PDB file : Tito_Scwrl_2PRC.pdb: