Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMTMTQQMITIAMVVLGTMLTRFLPFMIFPSGKPTPKYVQYLGKVLPSAVIGLLVIYCLKDVSLLSGSHGIPELVGAAAVVLLHLWKKNMLLSIAGGTVVYMVLVQLVF
3J27 Chain:B ((38-50))----------------------------------------------------------------------------------------RHPGFTIMAAILA---------


General information:
TITO was launched using:
RESULT:

Template: 3J27.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 5 -1025 -205.00 -78.85
target 2D structure prediction score : 0.15
Monomeric hydrophicity matching model chain B : 0.36

3D Compatibility (PKB) : -205.00
2D Compatibility (Sec. Struct. Predict.) : 0.15
1D Compatibility (Hydrophobicity) : 0.36
QMean score : 0.353

(partial model without unconserved sides chains):
PDB file : Tito_3J27.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J27-query.scw
PDB file : Tito_Scwrl_3J27.pdb: