Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKLIQLALFFTLMLTGCSNSSTSSESKVETTVKTTAAFPQKELEKELKKLKPVSLDMKFESPLATELGKRKAKEEAEKQRQIAAEKKLEKEREAKRKKQQEEKAERQRLAEQQAAERQRLAEAERQAELERQRQAAIQKEQKANAEKKRQSQAQRQQTEAPSSNSQDPPSSSSQTDKTIQQPASELPDDDGYGYEERKKWHDDQVEWGIKQGYIDPEDAP
4MH6 Chain:A ((60-158))---------------------------KAERSVADYHVWRQEEEERRFAKAKQQTVLLKELETLRQEIALLREREAELKQRVAEVKVTLEQERTLLKQKQQEALQAHKTKEKFVQLQQQEIAEQSR-----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 106 7100 66.98 71.71
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 66.98
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.692

(partial model without unconserved sides chains):
PDB file : Tito_4MH6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MH6-query.scw
PDB file : Tito_Scwrl_4MH6.pdb: