Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPSVESFELDHNAVVAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRSHAEKYDHFDIIDISPMGCQTGYYLVVSGEPTSAEIVDLLEDTMKEAVEITE---IPAANEKQCGQAKLHDLEGAKRLMRFWLSQDKEELLKVFG
1JOE Chain:D ((9-144))--------VDHTKMNAPAVRIAKTMLTPKGDNITVFDLRFCIPNKEILSPKGIHTLEHLFAGFMRDHLNG-DSIEIIDISPMGCRTGFYMSLIGTPNEQKVSEAWLASMQDVLGVQDQASIPELNIYQCGSYTEHSLEDAHEIAK---------------


General information:
TITO was launched using:
RESULT:

Template: 1JOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 569 -74357 -130.68 -559.07
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain D : 0.72

3D Compatibility (PKB) : -130.68
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_1JOE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JOE-query.scw
PDB file : Tito_Scwrl_1JOE.pdb: