Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFCTFFEKHHRKWDILLEKSTGVMEAMKVTSEEKEQLSTAIDRMNEGLDAFIQLYNESEIDEPLIQLDDDTAELMKQARDMYGQEKLNEKLNTIIKQILSISVSEEGEKE
2MDV Chain:A ((5-23))----------------------------------------------------------------IWLSDQTLEDLEKMARREG---------------------------


General information:
TITO was launched using:
RESULT:

Template: 2MDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 12 -1497 -124.71 -78.76
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -124.71
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.900

(partial model without unconserved sides chains):
PDB file : Tito_2MDV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2MDV-query.scw
PDB file : Tito_Scwrl_2MDV.pdb: