Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAVVIAVLLMLVLSLLRVNIVIALIIGALAGGLTGGLGLGETVKAFTDGLGGNATVAVSYAMLGAFAAALTKTGLPDAMVEASVKLIGNKEDSRKKALSKVL--IVLIILIVSCFSQNVVPVHIAFIPVLIPPLLKIFNELEMDRRL-----IACVITFGLTAPYILLPVGFGQIFQGMLKDNMADAGLNVPLADIPYALIIPVAGMVVG-LILSVIVYRKPKQYETKDISGAEASPYTRKSIGIAVLAIVVSLGVQLYLSQTLG-V----EGMIMGALAGLIVLFVSGVMKRDEADSLITDGMVLMAFIGFVMLVAAGFSNVLTKTGDVESLVKTSAGFIG-HSQSLGALLMLIVGLLITMGIGSSFATIPVITTIFVPLCMQLGFSPMATIAIIGAAAALGDAGSPASDSTLGPTSGLSADGQHHHIWDTCVPTFIFYNIPLVIFGWIAALVL
4F35 Chain:D ((40-441))-------AFIAVLWLTEALHVTVTAILVPVMAVFFGIFETQAALNNFAN----S--IIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGK-------MSVAVFMLFGVTALLSMWISN-----TATAAMMLPLVLGVLSKVDADKQRSTYVFVLLGVAYSASIGGIATLVGSP---PNAIAAA----EVGLSFTDWMKFGLPTAMMMLPMAIAILYFLL----------------VNWD-KGKVVTLGIFGLTVFLWIFSSPINAALGGFKSFDTLVALGAILMLSFARVVHWKEIQKTADWGVL------LLFGGGLCLSNVLKQTGTSVFLANALSDMVSHMGIFVVILVVATFVVFLTEFA-SNTASAALLIPVFATVAEAFGMSPVLLSVLIAVAASC-AFMLPVATPPNAIVFAS--G-HI-KQSE-----MMRVGLYLNIACIGLLT--


General information:
TITO was launched using:
RESULT:

Template: 4F35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1964 -247087 -125.81 -660.66
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain D : 0.70

3D Compatibility (PKB) : -125.81
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.327

(partial model without unconserved sides chains):
PDB file : Tito_4F35.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F35-query.scw
PDB file : Tito_Scwrl_4F35.pdb: