Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRKYLKLMIGLALAATLTLSGCSLPGLSAAADQTIKIGAQSMSESEIIASMLGQLIEHHTDLKTTTIKNLGSNAVQQQALMNGEIDIAATRYTGDALTGTLRMEPEKDPDKALAL--TQREFKKRYDLKWYDSYGFDNTYAFTVSKELADQYHLETVSDVKKWAPQLKLGVDNYWMKLKGNGYQDFTKTYGMTFGGTYPMQIGLVYDAVKSGKMDIVLAYSTDGRIKSYGLKMLKDDKQFFPPYDCSPVVPEKVLKEHPELEGIIKKMLGKIDTATMQELNYEVDGNLKEPSVVAKEYLEKHRYFES
1SW1 Chain:A ((6-271))---------------------------------ERVVIGSKPFNEQYILANMIAILLEENG-YKAEVKEGLGGTLVNYEALKRNDIQLY-VEYTGTAYNVILRKQPPELWDQQYIFDEVKKGLLEADGVVVAAKLGFRDDYALAVRADWAEENGVEKISDLAEFADQLVFGSDPEFAS-RPDGLPQIKKVYGFEFKEVKQMEPTLMYEAIKNKQVDVIPAYTTDSRVDLFNLKILEDDKGALPPYDAIIIVNGNTAKDE-KLISVLKLLEDRIDTDTMRALNYQYDVEKKDAREIAMSFLKEQ-----


General information:
TITO was launched using:
RESULT:

Template: 1SW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1429 63142 44.19 239.17
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 44.19
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_1SW1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SW1-query.scw
PDB file : Tito_Scwrl_1SW1.pdb: